Phocaeicola vulgatus strain AM43-4BH

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus strain AM43-4BH is a Gram-positive, rod-shaped anaerobic bacterium that predominantly exists in a host-associated habitat. This strain is characterized by its arrangement of single cells, which is typical for many anaerobes that thrive in specific ecological niches within host organisms. As a member of the genus Phocaeicola, this strain is part of a broader group that has been implicated in various symbiotic relationships, potentially contributing to the microbial diversity within its associated host. The anaerobic nature of P. vulgatus strain AM43-4BH suggests that it may play a role in processes that occur in low-oxygen environments, such as the fermentation of complex carbohydrates, which can influence the host's metabolic processes and overall health. Understanding the specific interactions and functions of P. vulgatus strain AM43-4BH within its host could provide insight into the dynamics of microbial communities and their contributions to the host's physiological conditions. This underscores the importance of studying such strains, as they may offer key insights into the roles of anaerobic bacteria in maintaining host homeostasis and their potential implications in symbiotic relationships.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus strain AM43-4BH
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain AM43-4BH

Accession NumberQSFK00000000.1

Gene Summary

Adenine Count

1506264 bp

Thymine Count

1483148 bp

Guanine Count

1054015 bp

Cytosine Count

1111250 bp

Genome Length

5155765 bp

Protein-coding Genes

4166 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phage morphogenesis proteinDW935_01035Not Available-196699 - 19732224206.4
Hypothetical proteinDW935_01040Not Available-197325 - 1975347985.59
Structural proteinDW935_01045Not Available-197527 - 19889752780.3
Putative portal proteinDW935_01050Not Available-198897 - 20031254797.1
Trna-glu;Not AvailableNot Available+200023 - 200098Not Available
duf1320 domain-containing proteinDW935_01055Not Available-200338 - 20077216657.4
Trna-ser;Not AvailableNot Available+200451 - 200540Not Available
Large terminaseDW935_01060Not Available-200774 - 20230659017.2
Trna-cys;Not AvailableNot Available+201220 - 201294Not Available
dde transposase family proteinDW935_01065Not Available-202308 - 20275417088.9

Displaying genes 1 – 10 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites