Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM43-4BH
Accession NumberQSFK00000000.1
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage morphogenesis protein | DW935_01035 | Not Available | - | 196699 - 197322 | 24206.4 |
| Hypothetical protein | DW935_01040 | Not Available | - | 197325 - 197534 | 7985.59 |
| Structural protein | DW935_01045 | Not Available | - | 197527 - 198897 | 52780.3 |
| Putative portal protein | DW935_01050 | Not Available | - | 198897 - 200312 | 54797.1 |
| Trna-glu; | Not Available | Not Available | + | 200023 - 200098 | Not Available |
| duf1320 domain-containing protein | DW935_01055 | Not Available | - | 200338 - 200772 | 16657.4 |
| Trna-ser; | Not Available | Not Available | + | 200451 - 200540 | Not Available |
| Large terminase | DW935_01060 | Not Available | - | 200774 - 202306 | 59017.2 |
| Trna-cys; | Not Available | Not Available | + | 201220 - 201294 | Not Available |
| dde transposase family protein | DW935_01065 | Not Available | - | 202308 - 202754 | 17088.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
