Agathobacter rectalis strain AM44-1AT

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AM44-1AT is a Gram-positive, non-motile, rod-shaped bacterium classified as a chemoheterotroph. It is an anaerobic organism, thriving in environments devoid of oxygen. This strain is mesophilic, with an optimal growth temperature of 37°C, which aligns with the human body temperature, indicating a potential association with human hosts, specifically Homo sapiens. The organism has a single replicon and a single membrane, which is typical for many bacteria and suggests a streamlined cellular structure. Notably, Agathobacter rectalis strain AM44-1AT does not undergo sporulation, indicating a reliance on stable conditions for survival and reproduction rather than a capacity to withstand extreme environmental stressors through spore formation. As a free-living bacterium, Agathobacter rectalis strain AM44-1AT may play a role in various ecological niches, including those associated with human microbiota. Its presence in the human gut could suggest a role in digestive processes or microbiome dynamics. Understanding the specific functions and interactions of this strain within its habitat could provide insights into its ecological significance, particularly in relation to human health and the maintenance of gut microbiota balance. The accession number for this strain is QSFB00000000.1, which may be utilized for further genetic or taxonomic studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AM44-1AT

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AM44-1AT
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AM44-1AT AM44-1AT.Scaf75, whole

Gene Summary

Adenine Count

987430 bp

Thymine Count

959255 bp

Guanine Count

688850 bp

Cytosine Count

660798 bp

Genome Length

3296770 bp

Protein-coding Genes

2935 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1920594 - 1920606Not Available
Tyrosine-type recombinase/integraseDW948_08885Not AvailableNegative1920625 - 192164139396.3
hypothetical proteinDW948_08890Not AvailableNegative1921781 - 192233221286.3
Helix-turn-helix domain-containing proteinDW948_08895Not AvailableNegative1922574 - 192296314757.8
Putative papsDW948_08900Not AvailablePositive1923694 - 192501650172.9
hypothetical proteinDW948_08905Not AvailablePositive1925032 - 19252478366.06
Toxin-antitoxin system, antitoxin component, xre family proteinDW948_08910Not AvailablePositive1925249 - 19254527624.22
xre family transcriptional regulatorDW948_08915Not AvailablePositive1925498 - 192591115256.2
Hypothetical proteinDW948_08920Not AvailablePositive1925924 - 192654723637.4
PentapeptideDW948_08925Not AvailablePositive1926537 - 192738232146.9

Displaying genes 1 – 10 of 3036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.