Parabacteroides merdae strain AM48-24BH

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae strain AM48-24BH is a Gram-negative, anaerobic, rod-shaped bacterium primarily inhabiting the gastrointestinal tract of humans. This organism is part of the diverse gut microbiomes found in Homo sapiens, contributing to the complex ecosystem of gut flora. A notable characteristic of P. merdae AM48-24BH is its flagella presence, which may play a role in its motility within the viscous environment of the gut. The strain is characterized by having a single replicon, indicating a streamlined genetic structure that may facilitate its adaptation to the gut environment. In terms of health implications, P. merdae has been associated with the condition known as OSA (Obstructive Sleep Apnea). This connection underscores the potential influence of gut microbiota on broader health outcomes, particularly in relation to sleep disorders. The presence of specific strains within the gut microbiome, such as P. merdae, may reflect or contribute to the physiological states that impact overall health. The accession number for this strain is QSEO00000000.1, providing a reference point for further research and genomic analysis. Understanding the role of Parabacteroides merdae in the gut microbiome can offer insights into its functions and interactions within this critical ecosystem, highlighting the intricate relationships between gut bacteria and human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
Strainstrain AM48-24BH

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae strain AM48-24BH
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut microbiomes
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae strain AM48-24BH AM48-24BH.Scaf131, whole

Gene Summary

Adenine Count

1260690 bp

Thymine Count

1284508 bp

Guanine Count

1078856 bp

Cytosine Count

1052974 bp

Genome Length

4677028 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4290 domain-containing proteinDW973_04410Not AvailableNegative1082791 - 108339324007.9
glycoside hydrolase family 2DW973_04415Not AvailableNegative1083992 - 108584571149.1
beta-galactosidaseDW973_04420Not AvailableNegative1085850 - 108766168267.7
duf4965 domain-containing proteinDW973_04425Not AvailableNegative1087698 - 1090655111748.0
duf3823 domain-containing proteinDW973_04430Not AvailableNegative1090856 - 109153024490.2
ragb/susd family nutrient uptake outer membrane proteinDW973_04435Not AvailableNegative1091547 - 109337969894.9
susc/raga family tonb-linked outer membrane proteinDW973_04440Not AvailableNegative1093386 - 1096814128768.0
fecr family proteinDW973_04445Not AvailableNegative1096911 - 109790638299.0
hypothetical proteinDW973_04450Not AvailableNegative1098031 - 109948554600.8
hypothetical proteinDW973_04455Not AvailableNegative1099495 - 110123767159.6

Displaying genes 741 – 750 of 3425 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
OsaCausesPMC12415091

Displaying health effects 1 – 1 of 1 in total