Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 29 | DW990_00490 | Not Available | Positive | 138393 - 139778 | 52626.5 |
| glycoside hydrolase family 36 | DW990_00495 | Not Available | Positive | 139785 - 141860 | 78413.9 |
| sulfatase | DW990_00500 | Not Available | Positive | 141879 - 143432 | 57829.6 |
| ribonuclease 3 | DW990_00505 | Not Available | Negative | 143577 - 144503 | 35251.2 |
| hypothetical | DW990_00510 | Not Available | Negative | 144506 - 145770 | 44522.4 |
| acyl carrier protein | DW990_00515 | Not Available | Negative | 145789 - 146025 | 8382.75 |
| phosphoribosylglycinamide formyltransferase | DW990_00520 | Not Available | Positive | 146178 - 146756 | 21386.1 |
| rna polymerase sigma-70 factor | DW990_00525 | Not Available | Negative | 146728 - 147273 | 21413.0 |
| susc/raga family tonb-linked outer membrane protein | DW990_00530 | Not Available | Positive | 147594 - 150635 | 112142.0 |
| rna polymerase sigma-70 factor | DW990_00540 | Not Available | Positive | 152583 - 153092 | 19967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

