Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag family conjugative transposon atpase | DW990_05860 | Not Available | Positive | 1439137 - 1441662 | 97131.7 |
| duf3876 domain-containing protein | DW990_05865 | Not Available | Positive | 1441659 - 1442027 | 13824.7 |
| duf4141 domain-containing protein | DW990_05870 | Not Available | Positive | 1442024 - 1442653 | 23991.7 |
| conjugative transposon protein trak | DW990_05880 | Not Available | Positive | 1443791 - 1444414 | 23932.5 |
| hypothetical protein | DW990_05885 | Not Available | Positive | 1444411 - 1444713 | 11208.7 |
| conjugative transposon protein tram | DW990_05890 | Not Available | Positive | 1444664 - 1445971 | 47921.2 |
| conjugative transposon protein tran | DW990_05895 | Not Available | Positive | 1446022 - 1446936 | 34913.4 |
| duf3872 domain-containing protein | DW990_05905 | Not Available | Positive | 1447540 - 1447998 | 17588.7 |
| glycoside hydrolase | DW990_05910 | Not Available | Positive | 1447995 - 1448474 | 18570.9 |
| hypothetical protein | DW990_05915 | Not Available | Negative | 1448841 - 1449695 | 33586.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

