Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | DW990_05730 | Not Available | Positive | 1413169 - 1414449 | 46829.6 |
| mate family efflux transporter | DW990_05735 | Not Available | Positive | 1414648 - 1415991 | 49290.3 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DW990_05745 | Not Available | Positive | 1416887 - 1417609 | 27910.3 |
| duf1460 domain-containing protein | DW990_05750 | Not Available | Negative | 1417581 - 1418465 | 33269.5 |
| biotin/lipoyl-binding protein | DW990_05755 | Not Available | Negative | 1418590 - 1420365 | 66685.7 |
| rna polymerase sigma factor | DW990_05760 | Not Available | Negative | 1420555 - 1421058 | 19667.6 |
| trimeric intracellular cation channel family protein | DW990_05765 | Not Available | Negative | 1421217 - 1421831 | 22186.8 |
| udp-n-acetyl glucosamine 2-epimerase | DW990_05770 | Not Available | Positive | 1421915 - 1423003 | 40222.9 |
| duf3078 domain-containing protein | DW990_05775 | Not Available | Negative | 1423104 - 1424498 | 53456.6 |
| ctp synthase | DW990_05780 | Not Available | Positive | 1424708 - 1426306 | 60081.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

