Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3244 domain-containing protein | DW990_05540 | Not Available | Negative | 1370212 - 1370532 | 11868.3 |
| hypothetical protein | DW990_05550 | Not Available | Negative | 1372938 - 1373282 | 12284.0 |
| nucleoside deaminase | DW990_05555 | Not Available | Positive | 1373331 - 1373798 | 16967.2 |
| aminoacyl-histidine dipeptidase | DW990_05560 | Not Available | Negative | 1373860 - 1375320 | 53173.6 |
| upf0104 family protein | DW990_05565 | Not Available | Negative | 1375317 - 1376321 | 37237.7 |
| ribosomal rna small subunit methyltransferase a | DW990_05570 | Not Available | Positive | 1376420 - 1377262 | 31910.9 |
| duf349 domain-containing protein | DW990_05580 | Not Available | Positive | 1378894 - 1380702 | 70127.0 |
| Trna-gln | Not Available | Not Available | Positive | 1380857 - 1380927 | Not Available |
| ribosome silencing factor | DW990_05590 | Not Available | Positive | 1381248 - 1381607 | 13409.9 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DW990_05595 | Not Available | Positive | 1381625 - 1383631 | 74632.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

