Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DW990_05340 | Not Available | Positive | 1326808 - 1327269 | 17929.7 |
| citrate/2-methylcitrate synthase | DW990_05350 | Not Available | Negative | 1327946 - 1329289 | 51078.6 |
| helicase | DW990_05365 | Not Available | Positive | 1332865 - 1334757 | 72814.7 |
| dihydrolipoamide acyltransferase | DW990_05370 | Not Available | Negative | 1334941 - 1335315 | 13047.7 |
| hypothetical protein | DW990_05375 | Not Available | Negative | 1335547 - 1336413 | 33184.5 |
| dna topoisomerase iii | DW990_05380 | Not Available | Positive | 1336687 - 1338828 | 79806.9 |
| rrna cytosine-c5-methyltransferase | DW990_05385 | Not Available | Negative | 1338965 - 1340392 | 53394.1 |
| hypothetical protein | DW990_05390 | Not Available | Positive | 1340524 - 1341231 | 26004.6 |
| duf5056 domain-containing protein | DW990_05400 | Not Available | Positive | 1341765 - 1342094 | 12369.2 |
| dihydrofolate reductase | DW990_05410 | Not Available | Positive | 1343053 - 1343547 | 18849.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

