Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxaloacetate decarboxylase | DW990_05280 | Not Available | Negative | 1317962 - 1318213 | 8725.21 |
| nitroreductase | DW990_05285 | Not Available | Negative | 1318481 - 1318981 | 18878.7 |
| had family hydrolase | DW990_05290 | Not Available | Positive | 1319044 - 1319697 | 24293.1 |
| doxx family protein | DW990_05300 | Not Available | Positive | 1319935 - 1320375 | 16186.6 |
| duf4435 domain-containing protein | DW990_05305 | Not Available | Negative | 1320381 - 1321376 | 39179.5 |
| atp-binding cassette domain-containing protein | DW990_05310 | Not Available | Negative | 1321398 - 1322219 | 31108.5 |
| sdr family nad(p)-dependent oxidoreductase | DW990_05320 | Not Available | Negative | 1323333 - 1324193 | 31842.1 |
| nadh:flavin oxidoreductase | DW990_05325 | Not Available | Negative | 1324190 - 1325413 | 45546.4 |
| duf1295 domain-containing protein | DW990_05330 | Not Available | Negative | 1325476 - 1326240 | 29496.6 |
| hypothetical protein | DW990_05335 | Not Available | Positive | 1326403 - 1326663 | 10353.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

