Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-acp reductase | DW990_05220 | Not Available | Negative | 1299425 - 1300282 | 31326.5 |
| glycoside hydrolase family 28 protein | DW990_05225 | Not Available | Positive | 1300659 - 1302278 | 59146.7 |
| duf4861 domain-containing protein | DW990_05230 | Not Available | Positive | 1302417 - 1303631 | 45689.1 |
| glycoside hydrolase | DW990_05235 | Not Available | Positive | 1303645 - 1305309 | 61567.8 |
| sigma-70 family rna polymerase sigma factor | DW990_05240 | Not Available | Positive | 1305410 - 1305994 | 23217.7 |
| susc/raga family tonb-linked outer membrane protein | DW990_05250 | Not Available | Positive | 1307276 - 1310593 | 122565.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_05255 | Not Available | Positive | 1310614 - 1312104 | 55759.7 |
| tlpa family protein disulfide reductase | DW990_05265 | Not Available | Positive | 1313289 - 1314638 | 50412.1 |
| sodium ion-translocating decarboxylase subunit beta | DW990_05270 | Not Available | Negative | 1314834 - 1316069 | 44261.9 |
| oxaloacetate decarboxylase | DW990_05275 | Not Available | Negative | 1316069 - 1317931 | 68972.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

