Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_04915 | Not Available | Negative | 1234594 - 1235310 | 27236.0 |
| hypothetical protein | DW990_04920 | Not Available | Negative | 1235494 - 1236441 | 35751.4 |
| rtec protein | DW990_04925 | Not Available | Negative | 1236552 - 1237187 | 23076.8 |
| transcriptional repressor | DW990_04945 | Not Available | Positive | 1243767 - 1244210 | 16870.5 |
| hypothetical protein | DW990_04960 | Not Available | Negative | 1247685 - 1248227 | 20152.8 |
| duf4465 domain-containing protein | DW990_04975 | Not Available | Positive | 1250120 - 1251037 | 33850.0 |
| cell surface protein | DW990_04980 | Not Available | Positive | 1251101 - 1252882 | 66402.9 |
| epidermal growth-factor receptor (egfr) l domain protein | DW990_04985 | Not Available | Positive | 1252897 - 1254987 | 76342.3 |
| ynce family protein | DW990_04990 | Not Available | Positive | 1255049 - 1256116 | 41108.6 |
| iron abc transporter substrate-binding protein | DW990_05000 | Not Available | Positive | 1258223 - 1259362 | 41753.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

