Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 97 protein | DW990_04710 | Not Available | Negative | 1176040 - 1178016 | 74812.3 |
| hypothetical protein | DW990_04715 | Not Available | Negative | 1178023 - 1179501 | 56240.3 |
| hypothetical protein | DW990_04720 | Not Available | Negative | 1179509 - 1181518 | 75379.2 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_04725 | Not Available | Negative | 1181612 - 1183246 | 62739.8 |
| glycoside hydrolase family 97 protein | DW990_04735 | Not Available | Negative | 1186410 - 1188338 | 73899.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DW990_04740 | Not Available | Negative | 1189307 - 1190188 | 31535.7 |
| signal recognition particle protein | DW990_04745 | Not Available | Negative | 1190302 - 1191624 | 48854.7 |
| mate family efflux transporter | DW990_04750 | Not Available | Negative | 1191723 - 1193045 | 48758.5 |
| rna polymerase sigma-70 factor | DW990_04760 | Not Available | Negative | 1194798 - 1195358 | 21971.5 |
| duf1624 domain-containing protein | DW990_04765 | Not Available | Negative | 1195383 - 1196474 | 40470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

