Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DW990_04315 | Not Available | Negative | 1076369 - 1077667 | 48354.2 |
| dihydropteroate synthase | DW990_04320 | Not Available | Positive | 1077786 - 1078643 | 32012.9 |
| tigr00159 family protein | DW990_04325 | Not Available | Positive | 1078675 - 1079439 | 28478.5 |
| gnat family n-acetyltransferase | DW990_04330 | Not Available | Negative | 1079517 - 1080527 | 39082.0 |
| duf2156 domain-containing protein | DW990_04335 | Not Available | Negative | 1080511 - 1081413 | 34328.3 |
| lrgb family protein | DW990_04340 | Not Available | Negative | 1081637 - 1082332 | 24440.0 |
| phosphate acetyltransferase | DW990_04350 | Not Available | Positive | 1082868 - 1083881 | 35492.5 |
| acetate kinase | DW990_04355 | Not Available | Positive | 1083907 - 1085103 | 42809.0 |
| udp-2,3-diacylglucosamine diphosphatase | DW990_04360 | Not Available | Negative | 1085169 - 1085936 | 29795.7 |
| duf59 domain-containing protein | DW990_04365 | Not Available | Negative | 1086069 - 1086389 | 11973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

