Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW990_04245 | Not Available | Positive | 1045958 - 1049029 | 113256.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_04250 | Not Available | Positive | 1049042 - 1050595 | 58381.6 |
| beta-glucanase | DW990_04260 | Not Available | Negative | 1052040 - 1053182 | 42623.3 |
| tonb-dependent receptor | DW990_04275 | Not Available | Negative | 1057661 - 1060762 | 114541.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_04280 | Not Available | Negative | 1061165 - 1063189 | 76769.4 |
| tonb-dependent receptor | DW990_04285 | Not Available | Negative | 1063205 - 1066513 | 123703.0 |
| hypothetical protein | DW990_04290 | Not Available | Negative | 1066540 - 1066734 | 7450.09 |
| duf3810 domain-containing protein | DW990_04300 | Not Available | Negative | 1071083 - 1072123 | 40933.9 |
| duf2264 domain-containing protein | DW990_04305 | Not Available | Negative | 1072265 - 1074580 | 88883.0 |
| neuraminidase | DW990_04310 | Not Available | Negative | 1074672 - 1075946 | 49248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

