Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW990_04185 | Not Available | Negative | 1017548 - 1019182 | 62640.4 |
| helix-turn-helix domain-containing protein | DW990_04195 | Not Available | Negative | 1022363 - 1025203 | 108688.0 |
| beta-galactosidase | DW990_04200 | Not Available | Negative | 1025390 - 1027738 | 88312.5 |
| alpha-l-arabinofuranosidase | DW990_04205 | Not Available | Negative | 1027755 - 1030253 | 92442.4 |
| glycoside hydrolase | DW990_04210 | Not Available | Negative | 1030281 - 1032224 | 73204.7 |
| alpha-l-rhamnosidase | DW990_04215 | Not Available | Negative | 1032478 - 1035996 | 132243.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_04220 | Not Available | Negative | 1036123 - 1037595 | 54813.8 |
| duf4974 domain-containing protein | DW990_04230 | Not Available | Negative | 1041152 - 1042096 | 36254.8 |
| rna polymerase sigma-70 factor | DW990_04235 | Not Available | Negative | 1042170 - 1042730 | 22126.4 |
| helicase | DW990_04240 | Not Available | Positive | 1042934 - 1045447 | 97309.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

