Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW990_03365 | Not Available | Positive | 804040 - 806217 | 85976.4 |
| hypothetical protein | DW990_03370 | Not Available | Negative | 806209 - 807033 | 31747.8 |
| bifunctional aspartate transaminase/aspartate 4-decarboxylase | DW990_03380 | Not Available | Positive | 808878 - 810518 | 62673.3 |
| peptidase s41 | DW990_03385 | Not Available | Positive | 810667 - 812064 | 52241.7 |
| copper homeostasis protein | DW990_03390 | Not Available | Positive | 812220 - 812708 | 17145.3 |
| duf4136 domain-containing protein | DW990_03395 | Not Available | Positive | 812832 - 813470 | 24032.2 |
| porin family protein | DW990_03400 | Not Available | Positive | 813512 - 814138 | 23463.7 |
| polyprenol monophosphomannose synthase | DW990_03405 | Not Available | Positive | 814291 - 815040 | 28446.6 |
| dihydroorotase | DW990_03410 | Not Available | Positive | 815037 - 816377 | 49602.5 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DW990_03415 | Not Available | Positive | 816374 - 817261 | 33449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

