Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,3-galactosidase b | DW990_03290 | Not Available | Negative | 780401 - 782218 | 68960.8 |
| xanthan lyase | DW990_03295 | Not Available | Positive | 782301 - 785171 | 106975.0 |
| hypothetical protein | DW990_03300 | Not Available | Positive | 785262 - 785579 | 12230.6 |
| hypothetical protein | DW990_03315 | Not Available | Negative | 790049 - 791833 | 69421.1 |
| amino acid-binding protein | DW990_03320 | Not Available | Negative | 792068 - 792484 | 15370.7 |
| phenylacetate--coa ligase | DW990_03325 | Not Available | Negative | 792498 - 793799 | 48529.4 |
| pyridoxal phosphate-dependent aminotransferase | DW990_03330 | Not Available | Negative | 793894 - 795198 | 48748.4 |
| indolepyruvate oxidoreductase subunit beta | DW990_03335 | Not Available | Negative | 795203 - 795784 | 21245.8 |
| amidohydrolase | DW990_03345 | Not Available | Negative | 797420 - 798181 | 28497.8 |
| duf418 domain-containing protein | DW990_03360 | Not Available | Positive | 802794 - 803978 | 45002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

