Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DW990_03060 | Not Available | Negative | 732899 - 733435 | 21672.0 |
| duf4476 domain-containing protein | DW990_03065 | Not Available | Positive | 733735 - 734406 | 25476.8 |
| duf4476 domain-containing protein | DW990_03070 | Not Available | Positive | 734440 - 735051 | 22983.7 |
| hypothetical protein | DW990_03075 | Not Available | Negative | 735121 - 735444 | 11453.6 |
| cytidine deaminase | DW990_03080 | Not Available | Positive | 735663 - 736142 | 17702.2 |
| winged helix dna-binding domain-containing protein | DW990_03085 | Not Available | Positive | 736139 - 737191 | 40499.8 |
| sgnh/gdsl hydrolase family protein | DW990_03090 | Not Available | Negative | 737258 - 738769 | 57342.3 |
| abc-f family atpase | DW990_03095 | Not Available | Negative | 738958 - 740577 | 61289.0 |
| nucleotide exchange factor grpe | DW990_03100 | Not Available | Positive | 740755 - 741375 | 23521.8 |
| molecular chaperone dnaj | DW990_03105 | Not Available | Positive | 741395 - 742570 | 42231.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

