Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM51-1
Accession NumberQSEC00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | DW990_00245 | Not Available | + | 63059 - 64114 | 40157.7 |
| arylsulfatase | DW990_00250 | Not Available | + | 64262 - 65824 | 57637.2 |
| alpha-l-arabinofuranosidase | DW990_00255 | Not Available | - | 66626 - 68605 | 75354.2 |
| arabinan endo-1,5-alpha-l-arabinosidase | DW990_00260 | Not Available | - | 68629 - 70164 | 57812.3 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_00280 | Not Available | + | 80403 - 82154 | 66225.7 |
| hypothetical protein | DW990_00285 | Not Available | + | 82179 - 83957 | 64373.9 |
| arabinan endo-1,5-alpha-l-arabinosidase | DW990_00290 | Not Available | + | 84031 - 85914 | 70280.1 |
| cysteine--trna ligase | DW990_00295 | Not Available | + | 86289 - 87770 | 56338.1 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 87548 - 87917 | Not Available |
| 3-oxoacyl-acp reductase fabg | DW990_00305 | Not Available | + | 89525 - 90253 | 26439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
