Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | DW990_02775 | Not Available | Positive | 670965 - 672158 | 44966.5 |
| thioredoxin-dependent thiol peroxidase | DW990_02780 | Not Available | Positive | 672226 - 672672 | 16910.4 |
| duf4923 family protein | DW990_02790 | Not Available | Negative | 673802 - 674398 | 21300.9 |
| tonb-dependent receptor | DW990_02800 | Not Available | Negative | 676332 - 679370 | 110982.0 |
| arac family transcriptional regulator | DW990_02805 | Not Available | Positive | 679613 - 682432 | 107442.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | DW990_02810 | Not Available | Negative | 682537 - 683388 | 31272.2 |
| ribosomal rna large subunit methyltransferase h | DW990_02815 | Not Available | Positive | 683469 - 683942 | 18383.5 |
| endonuclease | DW990_02820 | Not Available | Negative | 684019 - 685029 | 38269.9 |
| hypothetical protein | DW990_02830 | Not Available | Positive | 686712 - 686939 | 8190.17 |
| omph family outer membrane protein | DW990_02835 | Not Available | Positive | 686962 - 687576 | 23115.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

