Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | DW990_02605 | Not Available | Negative | 628541 - 629068 | 20453.7 |
| type i dna topoisomerase | DW990_02610 | Not Available | Negative | 629065 - 631503 | 91403.2 |
| tonb-dependent receptor | DW990_02615 | Not Available | Negative | 631625 - 633322 | 64278.6 |
| nudix domain-containing protein | DW990_02625 | Not Available | Negative | 636257 - 636781 | 19814.6 |
| hlyc/corc family transporter | DW990_02630 | Not Available | Positive | 636916 - 638202 | 48001.9 |
| hypothetical protein | DW990_02635 | Not Available | Positive | 638225 - 638608 | 15190.0 |
| asnc family transcriptional regulator | DW990_02640 | Not Available | Positive | 638725 - 639183 | 17087.9 |
| duf4491 family protein | DW990_02645 | Not Available | Positive | 639190 - 639504 | 12155.1 |
| hypothetical protein | DW990_02650 | Not Available | Negative | 639704 - 641983 | 87445.4 |
| radical sam protein | DW990_02655 | Not Available | Negative | 641967 - 643265 | 50845.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

