Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | DW990_02315 | Not Available | Positive | 549221 - 551185 | 72969.4 |
| mfs transporter | DW990_02325 | Not Available | Positive | 554264 - 555619 | 49058.2 |
| arac family transcriptional regulator | DW990_02330 | Not Available | Positive | 556325 - 556810 | 19011.1 |
| hypothetical protein | DW990_02340 | Not Available | Negative | 559947 - 561542 | 62537.7 |
| alpha-amylase | DW990_02345 | Not Available | Positive | 561791 - 563641 | 70862.0 |
| glycoside hydrolase family 97 protein | DW990_02350 | Not Available | Positive | 563683 - 565899 | 84360.1 |
| hypothetical protein | DW990_02355 | Not Available | Positive | 565952 - 566131 | 7024.59 |
| tonb-dependent receptor | DW990_02360 | Not Available | Positive | 566299 - 569328 | 111498.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_02365 | Not Available | Positive | 569341 - 571035 | 63567.8 |
| susf/suse family outer membrane protein | DW990_02370 | Not Available | Positive | 571064 - 572200 | 41569.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

