Phocaeicola vulgatus strain AM51-1

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus strain AM51-1 is a Gram-positive, anaerobic rod-shaped bacterium that typically exists as single cells in its natural habitat. This strain is host-associated, indicating a potential relationship with a specific host organism, although the exact nature of this association is not detailed in the available data. The anaerobic nature of P. vulgatus strain AM51-1 suggests that it thrives in environments devoid of oxygen, which is characteristic of many gut-associated microbes. The rod shape and single-cell arrangement are common features among various bacterial species, contributing to diverse functional roles in microbial communities. The host-associated lifestyle of P. vulgatus strain AM51-1 may imply involvement in processes such as fermentation or the metabolism of complex carbohydrates, which are crucial for nutrient cycling and host health. Understanding the specific interactions and contributions of this strain within its ecological niche can provide insights into the broader dynamics of microbial communities, particularly in anaerobic environments. Further research could elucidate the specific roles of P. vulgatus strain AM51-1 in its host’s microbiome, potentially shedding light on its contributions to gut health and overall host physiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus strain AM51-1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain AM51-1

Accession NumberQSEC00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
2-oxoacid:ferredoxin oxidoreductase subunit betaDW990_00175Not Available-43016 - 4402036538.8
2-oxoacid:acceptor oxidoreductase subunit alphaDW990_00180Not Available-44044 - 4589166247.6
Trna-argNot AvailableNot Available+46302 - 46376Not Available
glycine c-acetyltransferaseDW990_00190Not Available-46444 - 4763443568.4
nad-dependent epimerase/dehydratase family proteinDW990_00195Not Available+47805 - 4875835283.4
m3 family peptidaseDW990_00210Not Available-53394 - 5548179015.5
endonucleaseDW990_00215Not Available-55508 - 5658740377.0
rhomboid family intramembrane serine proteaseDW990_00220Not Available-56591 - 5748433974.6
hu family dna-binding proteinDW990_00230Not Available+58352 - 586249278.25
dna-binding proteinDW990_00240Not Available+62217 - 6305632467.0

Displaying genes 31 – 40 of 3650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites