Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM51-1
Accession NumberQSEC00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DW990_00175 | Not Available | - | 43016 - 44020 | 36538.8 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DW990_00180 | Not Available | - | 44044 - 45891 | 66247.6 |
| Trna-arg | Not Available | Not Available | + | 46302 - 46376 | Not Available |
| glycine c-acetyltransferase | DW990_00190 | Not Available | - | 46444 - 47634 | 43568.4 |
| nad-dependent epimerase/dehydratase family protein | DW990_00195 | Not Available | + | 47805 - 48758 | 35283.4 |
| m3 family peptidase | DW990_00210 | Not Available | - | 53394 - 55481 | 79015.5 |
| endonuclease | DW990_00215 | Not Available | - | 55508 - 56587 | 40377.0 |
| rhomboid family intramembrane serine protease | DW990_00220 | Not Available | - | 56591 - 57484 | 33974.6 |
| hu family dna-binding protein | DW990_00230 | Not Available | + | 58352 - 58624 | 9278.25 |
| dna-binding protein | DW990_00240 | Not Available | + | 62217 - 63056 | 32467.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
