Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein | DW990_22265 | Not Available | Positive | 5058786 - 5059355 | 22140.5 |
| hypothetical protein | DW990_22280 | Not Available | Positive | 5061499 - 5062122 | 22094.0 |
| hypothetical protein | DW990_22285 | Not Available | Positive | 5062128 - 5062457 | 12638.3 |
| fic family protein | DW990_22290 | Not Available | Positive | 5062541 - 5062863 | 12778.5 |
| hypothetical protein | DW990_22295 | Not Available | Positive | 5062956 - 5063282 | 11948.6 |
| hypothetical protein | DW990_22300 | Not Available | Negative | 5063391 - 5064110 | 26426.4 |
| transposase | DW990_22310 | Not Available | Negative | 5064835 - 5065703 | 33717.1 |
| dde transposase | DW990_22315 | Not Available | Negative | 5065736 - 5066656 | 35966.7 |
| hypothetical protein | DW990_22320 | Not Available | Negative | 5066715 - 5067056 | 13524.2 |
| duf4422 domain-containing protein | DW990_22330 | Not Available | Positive | 5068605 - 5069504 | 36044.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

