Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DW990_22205 | Not Available | Negative | 5048050 - 5049855 | 70810.1 |
| lipopolysaccharide biosynthesis protein | DW990_22210 | Not Available | Positive | 5050485 - 5051924 | 53826.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DW990_22215 | Not Available | Positive | 5051934 - 5052557 | 23040.7 |
| hypothetical protein | DW990_22225 | Not Available | Positive | 5053859 - 5054041 | 6887.34 |
| Trna-ser | Not Available | Not Available | Positive | 5054020 - 5054110 | Not Available |
| isl3 family transposase | DW990_22235 | Not Available | Negative | 5054236 - 5054312 | 2936.61 |
| hypothetical protein | DW990_22245 | Not Available | Negative | 5055072 - 5055293 | 8758.57 |
| dde transposase | DW990_22250 | Not Available | Positive | 5056193 - 5057551 | 52858.8 |
| hypothetical protein | DW990_22255 | Not Available | Negative | 5057734 - 5057950 | 8133.8 |
| exo-poly-alpha-d-galacturonosidase | DW990_22260 | Not Available | Positive | 5058376 - 5058774 | 15624.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

