Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_21850 | Not Available | Positive | 4980974 - 4981525 | 21557.0 |
| susc/raga family tonb-linked outer membrane protein | DW990_21855 | Not Available | Positive | 4981763 - 4985041 | 120429.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW990_21860 | Not Available | Positive | 4985069 - 4986955 | 72167.2 |
| hypothetical protein | DW990_21885 | Not Available | Positive | 4989767 - 4991878 | 83353.2 |
| hypothetical protein | DW990_21890 | Not Available | Positive | 4991878 - 4992894 | 40099.2 |
| hypothetical protein | DW990_21895 | Not Available | Negative | 4993044 - 4993676 | 25234.4 |
| hypothetical protein | DW990_21900 | Not Available | Negative | 4994083 - 4994271 | 6688.22 |
| radical sam protein | DW990_21905 | Not Available | Negative | 4994803 - 4995579 | 29363.3 |
| duf4294 domain-containing protein | DW990_21915 | Not Available | Positive | 4997793 - 4998365 | 22062.0 |
| trmh family rna methyltransferase | DW990_21920 | Not Available | Negative | 4998396 - 4998932 | 19963.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

