Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | DW990_21620 | Not Available | Negative | 4935406 - 4936749 | 49108.8 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DW990_21625 | Not Available | Negative | 4936763 - 4937758 | 37117.2 |
| lysine--trna ligase | DW990_21630 | Not Available | Negative | 4937815 - 4939545 | 66493.3 |
| hypothetical protein | DW990_21635 | Not Available | Negative | 4939620 - 4940228 | 23097.2 |
| tlpa family protein disulfide reductase | DW990_21640 | Not Available | Positive | 4940460 - 4941002 | 20293.0 |
| n-acetylmuramoyl-l-alanine amidase | DW990_21645 | Not Available | Positive | 4941009 - 4941815 | 30759.2 |
| hypothetical protein | DW990_21650 | Not Available | Negative | 4942116 - 4943066 | 37059.5 |
| glycosyltransferase | DW990_21655 | Not Available | Negative | 4943204 - 4944121 | 35530.0 |
| hypothetical protein | DW990_21660 | Not Available | Negative | 4944155 - 4944640 | 18548.9 |
| hypothetical protein | DW990_21665 | Not Available | Negative | 4944631 - 4945542 | 35760.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

