Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW990_21545 | Not Available | Negative | 4918960 - 4919274 | 11713.1 |
| type ii toxin-antitoxin system rele/pare family toxin | DW990_21550 | Not Available | Negative | 4919280 - 4919627 | 13691.6 |
| clindamycin resistance transfer factor btga | DW990_21555 | Not Available | Positive | 4920018 - 4920623 | 23234.0 |
| hypothetical protein | DW990_21565 | Not Available | Negative | 4921503 - 4921736 | 8793.5 |
| hypothetical protein | DW990_21570 | Not Available | Negative | 4921905 - 4923404 | 57090.2 |
| hypothetical protein | DW990_21580 | Not Available | Positive | 4924116 - 4924568 | 15846.9 |
| hypothetical protein | DW990_21585 | Not Available | Positive | 4924606 - 4925382 | 29004.2 |
| type iv secretory system conjugative dna transfer family protein | DW990_21605 | Not Available | Negative | 4932174 - 4933085 | 34200.6 |
| rok family transcriptional regulator | DW990_21610 | Not Available | Positive | 4933276 - 4934481 | 44586.1 |
| had family hydrolase | DW990_21615 | Not Available | Negative | 4934522 - 4935256 | 27195.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

