Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DW990_21145 | Not Available | Negative | 4839976 - 4841748 | 68899.7 |
| glutathione peroxidase | DW990_21155 | Not Available | Positive | 4841959 - 4842498 | 20060.1 |
| upxy family transcription antiterminator | DW990_21165 | Not Available | Positive | 4843367 - 4843915 | 21158.1 |
| hypothetical protein | DW990_21170 | Not Available | Positive | 4844027 - 4844380 | 13750.7 |
| hypothetical protein | DW990_21180 | Not Available | Positive | 4845035 - 4846402 | 51320.3 |
| hypothetical protein | DW990_21195 | Not Available | Negative | 4850493 - 4850930 | 17467.4 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DW990_21200 | Not Available | Negative | 4851207 - 4853063 | 68853.2 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DW990_21210 | Not Available | Positive | 4856120 - 4857541 | 54018.2 |
| rlua family pseudouridine synthase | DW990_21215 | Not Available | Positive | 4857586 - 4858512 | 35718.2 |
| dde transposase | DW990_21225 | Not Available | Positive | 4859715 - 4859885 | 6718.92 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

