Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_21080 | Not Available | Positive | 4823040 - 4823573 | 20261.5 |
| flotillin family protein | DW990_21085 | Not Available | Positive | 4823599 - 4825299 | 62444.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DW990_21090 | Not Available | Positive | 4825446 - 4827317 | 69601.1 |
| adenine phosphoribosyltransferase | DW990_21095 | Not Available | Positive | 4827377 - 4827901 | 19189.4 |
| hypothetical protein | DW990_21100 | Not Available | Negative | 4827904 - 4828128 | 8505.38 |
| d-tyrosyl-trna(tyr) deacylase | DW990_21110 | Not Available | Positive | 4830106 - 4830558 | 16476.0 |
| pyrophosphatase | DW990_21115 | Not Available | Positive | 4830558 - 4830878 | 12366.8 |
| deoxyribose-phosphate aldolase | DW990_21120 | Not Available | Positive | 4830885 - 4831832 | 34798.2 |
| atp-dependent helicase | DW990_21130 | Not Available | Negative | 4833926 - 4837102 | 122721.0 |
| sigma-54-dependent fis family transcriptional regulator | DW990_21140 | Not Available | Negative | 4838599 - 4839939 | 50128.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

