Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW990_21010 | Not Available | Positive | 4807878 - 4808069 | 7349.02 |
| toll/interleukin-1 receptor domain-containing protein | DW990_21025 | Not Available | Positive | 4812850 - 4813776 | 35510.3 |
| duf4357 domain-containing protein | DW990_21030 | Not Available | Positive | 4813873 - 4814052 | 6791.06 |
| hypothetical protein | DW990_21035 | Not Available | Positive | 4814063 - 4815358 | 50783.2 |
| hypothetical protein | DW990_21040 | Not Available | Positive | 4815372 - 4815644 | 10386.9 |
| hypothetical protein | DW990_21045 | Not Available | Positive | 4815693 - 4816462 | 29931.2 |
| murein l,d-transpeptidase | DW990_21055 | Not Available | Positive | 4818122 - 4819141 | 38942.9 |
| hypothetical protein | DW990_21060 | Not Available | Positive | 4819144 - 4819941 | 29189.2 |
| hypothetical protein | DW990_21070 | Not Available | Positive | 4821120 - 4822352 | 44169.1 |
| endoribonuclease ybey | DW990_21075 | Not Available | Positive | 4822397 - 4822813 | 15838.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

