Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_20900 | Not Available | Positive | 4784255 - 4784559 | 11711.8 |
| hypothetical protein | DW990_20905 | Not Available | Positive | 4786030 - 4786533 | 19154.3 |
| hypothetical protein | DW990_20910 | Not Available | Positive | 4786524 - 4786721 | 7889.64 |
| mobilization protein | DW990_20915 | Not Available | Positive | 4786901 - 4787477 | 22599.9 |
| mobilization protein | DW990_20920 | Not Available | Positive | 4787728 - 4788663 | 36517.0 |
| hypothetical protein | DW990_20930 | Not Available | Positive | 4790446 - 4790874 | 16991.0 |
| rna polymerase sigma-70 factor | DW990_20935 | Not Available | Positive | 4790884 - 4791444 | 21736.7 |
| fecr family protein | DW990_20940 | Not Available | Positive | 4791489 - 4792523 | 40183.9 |
| susc/raga family tonb-linked outer membrane protein | DW990_20945 | Not Available | Positive | 4792625 - 4795867 | 120011.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_20950 | Not Available | Positive | 4795880 - 4797418 | 58808.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

