Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | DW990_20685 | Not Available | Negative | 4739775 - 4741265 | 56833.0 |
| hypothetical protein | DW990_20690 | Not Available | Negative | 4741380 - 4742531 | 44005.6 |
| 1,4-alpha-glucan-branching enzyme | DW990_20695 | Not Available | Negative | 4742535 - 4744562 | 78102.2 |
| yhch/yjgk/yial family protein | DW990_20700 | Not Available | Negative | 4744591 - 4745031 | 16248.5 |
| phosphatidylinositol-4-phosphate 5-kinase | DW990_20715 | Not Available | Negative | 4746602 - 4747705 | 42037.1 |
| insulinase family protein | DW990_20720 | Not Available | Negative | 4747791 - 4749077 | 48625.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DW990_20725 | Not Available | Negative | 4749078 - 4749836 | 28075.6 |
| is982 family transposase | DW990_20735 | Not Available | Positive | 4750374 - 4750537 | 6016.13 |
| site-specific integrase | DW990_20745 | Not Available | Positive | 4751124 - 4752233 | 43200.6 |
| mobilization protein | DW990_20750 | Not Available | Positive | 4752578 - 4753366 | 30394.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

