Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | DW990_20440 | Not Available | Positive | 4690971 - 4692983 | 76567.0 |
| dna alkylation repair protein | DW990_20445 | Not Available | Positive | 4692992 - 4693660 | 25707.3 |
| transcriptional repressor | DW990_20450 | Not Available | Positive | 4693691 - 4694182 | 19166.0 |
| low specificity l-threonine aldolase | DW990_20465 | Not Available | Negative | 4697235 - 4698251 | 37836.4 |
| mannose-6-phosphate isomerase | DW990_20475 | Not Available | Positive | 4699772 - 4700743 | 36200.5 |
| lactonase family protein | DW990_20480 | Not Available | Negative | 4700835 - 4702001 | 42700.8 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 4702142 - 4702536 | Not Available |
| rpn family recombination-promoting nuclease/putative transposase | DW990_20490 | Not Available | Negative | 4702794 - 4703672 | 33857.3 |
| hypothetical protein | DW990_20495 | Not Available | Negative | 4703817 - 4704041 | 8885.87 |
| hypothetical protein | DW990_20500 | Not Available | Positive | 4704493 - 4704675 | 6033.33 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

