Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | DW990_20390 | Not Available | Positive | 4679171 - 4680667 | 54450.0 |
| 3-isopropylmalate dehydratase large subunit | DW990_20395 | Not Available | Positive | 4680685 - 4682067 | 50051.1 |
| 3-isopropylmalate dehydratase small subunit | DW990_20400 | Not Available | Positive | 4682081 - 4682677 | 22407.5 |
| 2-isopropylmalate synthase | DW990_20405 | Not Available | Positive | 4682683 - 4684203 | 56824.1 |
| 3-isopropylmalate dehydrogenase | DW990_20410 | Not Available | Positive | 4684297 - 4685358 | 39089.9 |
| ahpc/tsa family protein | DW990_20415 | Not Available | Positive | 4685490 - 4686635 | 42891.5 |
| peptide-methionine (s)-s-oxide reductase | DW990_20420 | Not Available | Negative | 4686704 - 4687189 | 18625.0 |
| tetratricopeptide repeat protein | DW990_20425 | Not Available | Positive | 4687306 - 4688160 | 32582.4 |
| dna helicase recq | DW990_20430 | Not Available | Negative | 4688258 - 4690075 | 69144.0 |
| arac family transcriptional regulator | DW990_20435 | Not Available | Positive | 4690407 - 4690874 | 18149.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

