Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | DW990_20330 | Not Available | Positive | 4660488 - 4661285 | 29627.2 |
| hypothetical protein | DW990_20335 | Not Available | Positive | 4661301 - 4661579 | 10789.1 |
| fimbrillin family protein | DW990_20340 | Not Available | Positive | 4661650 - 4663464 | 68965.3 |
| gfo/idh/moca family oxidoreductase | DW990_20345 | Not Available | Negative | 4663751 - 4665397 | 62117.1 |
| duf1735 domain-containing protein | DW990_20355 | Not Available | Negative | 4668537 - 4669889 | 50619.8 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_20360 | Not Available | Negative | 4669926 - 4671839 | 73437.9 |
| fecr family protein | DW990_20370 | Not Available | Negative | 4675290 - 4676006 | 27497.2 |
| rna polymerase sigma-70 factor | DW990_20375 | Not Available | Positive | 4676527 - 4677075 | 22036.5 |
| hypothetical protein | DW990_20380 | Not Available | Negative | 4677948 - 4678496 | 20263.2 |
| hypothetical protein | DW990_20385 | Not Available | Positive | 4678561 - 4678830 | 9793.95 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

