Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | DW990_20155 | Not Available | Negative | 4624227 - 4625477 | 48109.4 |
| tolc family protein | DW990_20160 | Not Available | Negative | 4625562 - 4627031 | 55868.4 |
| sel1 repeat family protein | DW990_20165 | Not Available | Negative | 4627080 - 4628003 | 34896.5 |
| sigma-54-dependent fis family transcriptional regulator | DW990_20170 | Not Available | Positive | 4628227 - 4629594 | 51893.1 |
| atp-binding protein | DW990_20175 | Not Available | Positive | 4629591 - 4630922 | 50551.9 |
| Trna-pro | Not Available | Not Available | Positive | 4631083 - 4631160 | Not Available |
| hypothetical protein | DW990_20185 | Not Available | Positive | 4631235 - 4632557 | 51114.5 |
| transposase | DW990_20190 | Not Available | Negative | 4632625 - 4632951 | 12714.9 |
| hypothetical protein | DW990_20195 | Not Available | Positive | 4633073 - 4633501 | 16445.7 |
| hypothetical protein | DW990_20200 | Not Available | Positive | 4633444 - 4634214 | 28834.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

