Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW990_20100 | Not Available | Positive | 4611234 - 4613708 | 91585.5 |
| rna polymerase sigma factor | DW990_20105 | Not Available | Positive | 4613877 - 4614380 | 19779.6 |
| hypothetical protein | DW990_20110 | Not Available | Negative | 4614461 - 4614847 | 14818.4 |
| sodium-dependent transporter | DW990_20115 | Not Available | Positive | 4614943 - 4616307 | 49207.4 |
| helix-hairpin-helix domain-containing protein | DW990_20120 | Not Available | Positive | 4616315 - 4617217 | 35330.7 |
| alkaline phosphatase | DW990_20125 | Not Available | Negative | 4617214 - 4618632 | 51615.1 |
| hypothetical protein | DW990_20130 | Not Available | Positive | 4618725 - 4618919 | 7558.57 |
| hypothetical protein | DW990_20135 | Not Available | Positive | 4618936 - 4619436 | 19273.6 |
| abc transporter permease | DW990_20145 | Not Available | Negative | 4619969 - 4621806 | 69801.8 |
| abc transporter permease | DW990_20150 | Not Available | Negative | 4621820 - 4624216 | 92728.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

