Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4141 domain-containing protein | DW990_20045 | Not Available | Positive | 4599213 - 4599413 | 7227.46 |
| arac family transcriptional regulator | DW990_20050 | Not Available | Positive | 4599724 - 4600212 | 18915.8 |
| hypothetical protein | DW990_20055 | Not Available | Positive | 4600290 - 4603148 | 105416.0 |
| hypothetical protein | DW990_20060 | Not Available | Positive | 4603287 - 4603943 | 25847.1 |
| nudix domain-containing protein | DW990_20065 | Not Available | Positive | 4603894 - 4604784 | 34168.0 |
| nad-dependent epimerase/dehydratase family protein | DW990_20070 | Not Available | Positive | 4604792 - 4605634 | 31359.2 |
| m20/m25/m40 family metallo-hydrolase | DW990_20080 | Not Available | Negative | 4606123 - 4607187 | 39136.9 |
| long-chain fatty acid--coa ligase | DW990_20085 | Not Available | Positive | 4607401 - 4609206 | 68368.2 |
| peptide chain release factor 2 | DW990_20090 | Not Available | Positive | 4609264 - 4610379 | 42519.2 |
| cyth domain-containing protein | DW990_20095 | Not Available | Positive | 4610674 - 4611144 | 18359.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

