Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | DW990_19985 | Not Available | Positive | 4592147 - 4592287 | 5211.46 |
| para family protein | DW990_19990 | Not Available | Positive | 4592324 - 4592761 | 16216.8 |
| duf3408 domain-containing protein | DW990_19995 | Not Available | Positive | 4592764 - 4593192 | 16097.2 |
| hypothetical protein | DW990_20005 | Not Available | Positive | 4594432 - 4594887 | 17375.7 |
| hypothetical protein | DW990_20010 | Not Available | Positive | 4594909 - 4595337 | 17087.9 |
| duf4134 domain-containing protein | DW990_20015 | Not Available | Positive | 4595602 - 4595901 | 10308.8 |
| duf4133 domain-containing protein | DW990_20020 | Not Available | Positive | 4595925 - 4596245 | 12040.1 |
| duf3875 domain-containing protein | DW990_20025 | Not Available | Positive | 4596249 - 4596419 | 6093.28 |
| trag family conjugative transposon atpase | DW990_20030 | Not Available | Positive | 4596429 - 4598273 | 71514.2 |
| hypothetical protein | DW990_20040 | Not Available | Positive | 4598907 - 4599182 | 10175.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

