Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DW990_19865 | Not Available | Negative | 4563734 - 4564249 | 20186.8 |
| type ii toxin-antitoxin system hipa family toxin | DW990_19875 | Not Available | Negative | 4565107 - 4565997 | 34095.7 |
| phosphatidylinositol kinase | DW990_19880 | Not Available | Negative | 4566041 - 4566379 | 12582.2 |
| transcriptional regulator | DW990_19885 | Not Available | Negative | 4566376 - 4566582 | 7941.57 |
| duf2971 domain-containing protein | DW990_19890 | Not Available | Negative | 4566988 - 4567995 | 39092.6 |
| type ii toxin-antitoxin system hipa family toxin | DW990_19895 | Not Available | Negative | 4568047 - 4569138 | 41406.3 |
| duf3883 domain-containing protein | DW990_19900 | Not Available | Negative | 4569193 - 4573833 | 177407.0 |
| xre family transcriptional regulator | DW990_19905 | Not Available | Negative | 4573790 - 4574107 | 11732.1 |
| hypothetical protein | DW990_19910 | Not Available | Negative | 4574255 - 4574512 | 9354.42 |
| dna-binding protein | DW990_19915 | Not Available | Positive | 4574722 - 4575834 | 43314.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

