Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DW990_19720 | Not Available | Positive | 4535508 - 4535981 | 18038.0 |
| acyl carrier protein | DW990_19725 | Not Available | Positive | 4535995 - 4536219 | 8395.04 |
| long-chain fatty acid--coa ligase | DW990_19730 | Not Available | Positive | 4536233 - 4537441 | 45859.1 |
| hypothetical protein | DW990_19740 | Not Available | Positive | 4538231 - 4538422 | 7552.15 |
| glycosyl transferase | DW990_19745 | Not Available | Positive | 4538532 - 4539515 | 39270.1 |
| o-antigen ligase domain-containing protein | DW990_19755 | Not Available | Positive | 4540693 - 4542039 | 51071.1 |
| n-acetylmuramoyl-l-alanine amidase | DW990_19765 | Not Available | Negative | 4543559 - 4544164 | 23315.9 |
| dna-binding protein | DW990_19770 | Not Available | Negative | 4544262 - 4544768 | 18460.0 |
| duf4248 domain-containing protein | DW990_19775 | Not Available | Negative | 4545077 - 4545283 | 7792.31 |
| hypothetical protein | DW990_19785 | Not Available | Positive | 4547853 - 4548299 | 16817.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

