Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DW990_19660 | Not Available | Negative | 4521327 - 4522652 | 49635.6 |
| tetr/acrr family transcriptional regulator | DW990_19665 | Not Available | Negative | 4522689 - 4523342 | 25454.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW990_19670 | Not Available | Negative | 4523372 - 4524139 | 27537.9 |
| tolc family protein | DW990_19675 | Not Available | Negative | 4524163 - 4525548 | 50365.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DW990_19680 | Not Available | Negative | 4525560 - 4528778 | 116875.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW990_19685 | Not Available | Negative | 4528832 - 4530043 | 43695.5 |
| hypothetical protein | DW990_19695 | Not Available | Positive | 4532908 - 4533090 | 6713.74 |
| hypothetical protein | DW990_19700 | Not Available | Positive | 4533158 - 4533253 | 3749.81 |
| glutamate dehydrogenase | DW990_19705 | Not Available | Positive | 4533257 - 4533738 | 18483.1 |
| degt/dnrj/eryc1/strs family aminotransferase | DW990_19710 | Not Available | Positive | 4533739 - 4534333 | 22389.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

