Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3871 family protein | DW990_01885 | Not Available | Positive | 462723 - 463736 | 38245.9 |
| site-specific integrase | DW990_01890 | Not Available | Positive | 464045 - 464632 | 22501.7 |
| hypothetical protein | DW990_01895 | Not Available | Positive | 465220 - 465972 | 29871.3 |
| duf4595 domain-containing protein | DW990_01900 | Not Available | Positive | 466023 - 466823 | 30557.0 |
| hypothetical protein | DW990_01905 | Not Available | Negative | 467364 - 467486 | 4325.11 |
| 3-deoxy-d-manno-octulosonic acid transferase | DW990_01910 | Not Available | Negative | 468024 - 469244 | 46848.5 |
| glutamate--trna ligase | DW990_01915 | Not Available | Negative | 469257 - 470774 | 57877.2 |
| hdig domain-containing protein | DW990_01920 | Not Available | Positive | 470856 - 472913 | 79191.8 |
| low molecular weight phosphotyrosine protein phosphatase | DW990_01925 | Not Available | Negative | 472888 - 473358 | 17874.5 |
| phosphatase | DW990_01930 | Not Available | Negative | 473366 - 474076 | 26562.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

