Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW990_19355 | Not Available | Negative | 4466850 - 4467461 | 22691.8 |
| hemerythrin domain-containing protein | DW990_19360 | Not Available | Negative | 4467458 - 4468153 | 27000.4 |
| dna-binding response regulator | DW990_19370 | Not Available | Negative | 4469028 - 4469753 | 27838.9 |
| abc transporter permease | DW990_19380 | Not Available | Negative | 4470998 - 4472218 | 44142.1 |
| abc transporter atp-binding protein | DW990_19385 | Not Available | Negative | 4472237 - 4472980 | 27239.8 |
| efflux rnd transporter periplasmic adaptor subunit | DW990_19390 | Not Available | Negative | 4473022 - 4474245 | 44062.9 |
| tolc family protein | DW990_19395 | Not Available | Negative | 4474270 - 4475613 | 50272.4 |
| duf4492 domain-containing protein | DW990_19400 | Not Available | Positive | 4475767 - 4475985 | 8685.8 |
| cytochrome d ubiquinol oxidase subunit ii | DW990_19410 | Not Available | Positive | 4477663 - 4478808 | 42798.5 |
| 6-phosphogluconolactonase | DW990_19415 | Not Available | Negative | 4479104 - 4479808 | 26417.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

