Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | DW990_19285 | Not Available | Positive | 4447592 - 4448119 | 19617.8 |
| acyltransferase | DW990_19295 | Not Available | Negative | 4448917 - 4449804 | 33233.4 |
| agmatine deiminase family protein | DW990_19300 | Not Available | Negative | 4449816 - 4450841 | 39316.7 |
| sodium:proton antiporter | DW990_19315 | Not Available | Positive | 4456175 - 4457626 | 51409.2 |
| aminopeptidase | DW990_19320 | Not Available | Positive | 4457738 - 4459114 | 51836.2 |
| transcriptional regulator | DW990_19325 | Not Available | Positive | 4459611 - 4460411 | 30522.7 |
| formate c-acetyltransferase | DW990_19330 | Not Available | Positive | 4460717 - 4462945 | 84089.3 |
| pyruvate formate lyase-activating protein | DW990_19335 | Not Available | Positive | 4463014 - 4463742 | 28011.5 |
| hypothetical protein | DW990_19340 | Not Available | Negative | 4463844 - 4464431 | 21730.2 |
| (fe-s)-binding protein | DW990_19350 | Not Available | Negative | 4465798 - 4466538 | 27278.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

