Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4373 domain-containing protein | DW990_19225 | Not Available | Negative | 4433607 - 4433978 | 14419.2 |
| hypothetical protein | DW990_19230 | Not Available | Negative | 4434063 - 4434428 | 14381.4 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_19240 | Not Available | Positive | 4437956 - 4440013 | 77860.3 |
| ompa family protein | DW990_19245 | Not Available | Positive | 4440419 - 4441552 | 41278.9 |
| port family protein | DW990_19250 | Not Available | Positive | 4441690 - 4442328 | 22898.2 |
| hypothetical protein | DW990_19255 | Not Available | Positive | 4442697 - 4443218 | 21224.9 |
| porin family protein | DW990_19260 | Not Available | Positive | 4443240 - 4443761 | 19772.5 |
| flavodoxin flda | DW990_19265 | Not Available | Positive | 4444033 - 4444536 | 17963.1 |
| duf2023 family protein | DW990_19270 | Not Available | Positive | 4444553 - 4444897 | 13388.6 |
| thioredoxin | DW990_19275 | Not Available | Positive | 4445230 - 4445526 | 11450.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

