Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_19000 | Not Available | Negative | 4392247 - 4392543 | 11519.8 |
| hypothetical protein | DW990_19005 | Not Available | Negative | 4392537 - 4393064 | 21259.7 |
| tail tape measure protein | DW990_19010 | Not Available | Negative | 4393061 - 4394044 | 36090.2 |
| hypothetical protein | DW990_19015 | Not Available | Negative | 4394070 - 4394480 | 15172.2 |
| type vi secretion system needle protein hcp | DW990_19020 | Not Available | Negative | 4394494 - 4394916 | 15879.0 |
| atp-dependent clp protease atp-binding subunit | DW990_19025 | Not Available | Negative | 4394928 - 4397567 | 98577.8 |
| type vi secretion system needle protein hcp | DW990_19030 | Not Available | Positive | 4397672 - 4398070 | 15197.9 |
| hypothetical protein | DW990_19040 | Not Available | Positive | 4400004 - 4401362 | 52549.6 |
| hypothetical protein | DW990_19045 | Not Available | Positive | 4401407 - 4401880 | 17408.3 |
| type vi secretion system contractile sheath protein tssc | DW990_19050 | Not Available | Positive | 4401886 - 4403253 | 51653.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

