Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_18875 | Not Available | Positive | 4364396 - 4364836 | 16654.3 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_18890 | Not Available | Negative | 4367556 - 4369004 | 54497.3 |
| susc/raga family tonb-linked outer membrane protein | DW990_18895 | Not Available | Negative | 4369024 - 4372377 | 125069.0 |
| fecr family protein | DW990_18900 | Not Available | Negative | 4372393 - 4373562 | 44559.6 |
| rna polymerase sigma-70 factor | DW990_18905 | Not Available | Negative | 4373664 - 4374215 | 21576.8 |
| endonuclease muts2 | DW990_18910 | Not Available | Negative | 4374295 - 4376799 | 95122.6 |
| Trna-ser | Not Available | Not Available | Positive | 4376946 - 4377033 | Not Available |
| macrolide efflux mfs transporter mef(en2) | DW990_18920 | Not Available | Positive | 4377357 - 4378562 | 44135.4 |
| lincosamide nucleotidyltransferase lnu(an2) | DW990_18925 | Not Available | Positive | 4378587 - 4379099 | 19690.2 |
| steroid delta-isomerase | DW990_18930 | Not Available | Negative | 4379547 - 4379900 | 13706.5 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

