Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW990_18805 | Not Available | Negative | 4350543 - 4350863 | 11907.8 |
| hypothetical protein | DW990_18810 | Not Available | Negative | 4351006 - 4351281 | 11314.7 |
| hypothetical protein | DW990_18820 | Not Available | Positive | 4352558 - 4352773 | 8336.9 |
| isl3 family transposase | DW990_18830 | Not Available | Positive | 4353706 - 4353782 | 2936.61 |
| Trna-glu | Not Available | Not Available | Positive | 4353898 - 4353972 | Not Available |
| hypothetical protein | DW990_18840 | Not Available | Positive | 4354115 - 4355404 | 48157.5 |
| deoxyribonuclease iv | DW990_18845 | Not Available | Positive | 4355447 - 4356283 | 31410.4 |
| marr family transcriptional regulator | DW990_18850 | Not Available | Negative | 4356758 - 4358830 | 78512.4 |
| trka family potassium uptake protein | DW990_18865 | Not Available | Positive | 4362833 - 4363519 | 25637.0 |
| duf4738 domain-containing protein | DW990_18870 | Not Available | Positive | 4363734 - 4364303 | 21153.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

